Optimizing L-Tryptophan Production in Escherichia coli through Redox Balancing and Metabolomics Analysis.
Tongxin Wan, Dongqin Ding, Junqing Chen, Yaru Zhu, Huiying Wang, Zixiang Xu, Junlin Yang, Yufeng Wang, Jia Song, Dawei Zhang
Abstract
Open AccessL-tryptophan (L-trp) is a key aromatic amino acid with significant industrial value, and microbial fermentation provides a sustainable alternative to traditional chemical synthesis. However, low production yields due to inefficient microbial strains remain a major challenge. In this study, we enhanced L-trp production through redox engineering of Escherichia coli TX1. Metabolomics analysis at various fermentation stages revealed dynamic changes in the metabolites of the aromatic amino acid pathway. A key bottleneck was identified in the shikimate pathway, where significant accumulation of chorismate and shikimate led to inefficient L-trp production. By optimizing the shikimate pathway, L-trp production was increased by 19.8%. Additionally, the continuous accumulation of phosphoenolpyruvate suggested a limitation in the supply of erythrose-4-phosphate, which participates in the same reaction. Redirecting carbon flux from fructose-6-phosphate toward erythrose-4-phosphate increased the precursor pool of erythrose-4-phosphate. To overcome nutritional limitations, exogenous addition of amino acids, vitamins, and salt ions to the fermentation medium was implemented. Systematic metabolic engineering and fermentation optimization led to a significant improvement in tryptophan production, achieving an 86.6% increase compared to the original level. This study lays a solid foundation for the future development of more efficient tryptophan-producing strains.