Algorithms for molecular biology : AMB
Rna triplet repeats: improved algorithms for structure prediction and interactions.
Kimon Boehmer, Sarah J Berkemer, Sebastian Will, Yann Ponty
Published: 202510.1186/s13015-025-00292-8
Abstract
RNAs composed of Triplet Repeats (TR) have recently attracted much attention in the field of synthetic biology. We study the mimimum free energy (MFE) secondary structures of such RNAs and give improved algorithms to compute the MFE and the partition…
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