Nature biotechnology
Detecting and quantifying circular RNAs in terabyte-scale RNA-seq datasets with CIRI3.
Xin Zheng, Jinyang Zhang, Lipu Song, Xiang Jennie Li, Fangqing Zhao, Yuan Gao
Published: 202510.1038/s41587-025-02835-1
Abstract
To address recent challenges in circular RNA (circRNA) analysis, we present CIRI3, a tool for circRNA detection and quantification in terabyte-scale RNA-sequencing datasets. Using dynamic multithreaded task partitioning and a blocking search strategy…
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