ACS synthetic biologyAlgorithmsRNADNASoftwareBase Pairing
Models and Algorithms for Equilibrium Analysis of Mixed-Material Nucleic Acid Systems.
Avinash Nanjundiah, Mark E Fornace, Samuel J Schulte, Niles A Pierce
Published: 202610.1021/acssynbio.5c00470
Abstract
Dynamic programming algorithms within the NUPACK software suite enable analysis of equilibrium base-pairing properties for complex and test tube ensembles containing arbitrary numbers of interacting nucleic acid strands. Currently, calculations are l…
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