BiochemistryEndopeptidase ClpMolecular Dynamics SimulationMachine LearningProtein ConformationBacterial Proteins
Probing the Gate-Opening Transition in the Bacterial ClpP Peptidase Using Molecular Dynamics Simulations and Machine Learning.
Tharushi Rajaguru, Ashan Dayananda, Hayden Dennison, George Stan
Published: 202510.1021/acs.biochem.5c00389
Abstract
Preserving proteome integrity is crucial for maintaining cell viability across all kingdoms of life. The bacterial caseinolytic protease (ClpP) plays a critical role in maintaining protein homeostasis by degrading misfolded or damaged proteins within…
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