Achieving handle-level random access in an encrypted DNA archival storage system via frequency dictionary mapping coding.
Ben Cao, Xue Li, Bin Wang, Tiantian He, Yanfen Zheng, Xiaokang Zhang, Qiang Zhang
Abstract
Open AccessDNA storage provides a high storage density and durability, but current systems experience high latency and lack data security. This study proposed the use of frequency dictionary mapping coding (FDMC) to enable handle-level random access of DNA archival storage. In addition, a hybrid e-molecular encryption strategy and a multi-level error-correction algorithm were introduced to ensure data security and integrity. The simulation and wet experiment results demonstrated that FDMC achieved handle-level random access in a lossless encrypted DNA storage system, which balanced security and robustness. Even in extreme cases, in which there was a 10% loss of DNA sequences, this system still recovered 91.74% of the original data while ensuring a storage density above 1.80 bits per nucleotide. In summary, FDMC enhances the application potential of DNA as a storage medium and bridges the gap between DNA storage and traditional storage modes.